CASSIA/CASSIA_python_tutorial.py,sha256=QSIFdDGFw3FkTnuXp1UtQN5zO_mRz49Zbu8BC6O4eS8,109176
CASSIA/LLM_evaluation_getscore.py,sha256=6KjdYw8GHSnWRw8pM7cUZlqHX7R8pIkaBH5RCnR8ox8,2992
CASSIA/LLM_evaluation_test.py,sha256=XHO00mULyd_M81SSS1RqbDevNLOd7IlFBCfYs8ZhsOA,25681
CASSIA/__init__.py,sha256=B-5SdWOzXX6Wfi5kCiy2fkobJaYCj8lGEYOCfqeYRJQ,13646
CASSIA/generate_comparison.py,sha256=iSnfFhXxPHevDM0MFL3QDme1hAdQGNvWUMPhiuy90-o,19134
CASSIA/run_full_test.py,sha256=-br5e5MLlIL4t2z_8BO1sMhUipqWZujbjpYFGDBaSaU,2611
CASSIA/agents/__init__.py,sha256=9zcskL3fO-hBOlGZDQbqsLk13OXxAdto99faxs8FYd4,1604
CASSIA/agents/annotation_boost/__init__.py,sha256=nwkyC2GM96-UcqNjAA8UgBKoaPOJASjJmr03Qd4SU40,524
CASSIA/agents/annotation_boost/annotation_boost.py,sha256=vprfCaqI75KokDHJqg1mdrkY8j_S1tgAic7M2xZm-_s,118070
CASSIA/agents/annotation_boost/super_annotation_boost.py,sha256=ccSMwpw1Slv0AlvIH3cPHzhNob0eiS4LOXYSAJglS0k,128672
CASSIA/agents/merging/__init__.py,sha256=arBYTlKA-nSQqHKWibc2kaI4Rod6Q5KomZk4Z7-2OFc,159
CASSIA/agents/merging/merging_annotation.py,sha256=QP42EZ6g8BEN19CkMAwsKfIpprCYOOGr5DIz4-TK2k4,17673
CASSIA/agents/reference_agent/__init__.py,sha256=KMIlLeq3sxvR1n_zDksj-EJNOnl4DYIdCMXK3RtnqYo,906
CASSIA/agents/reference_agent/complexity_scorer.py,sha256=Wm0JzKQ-kg3BZSVQJUEIdUVBAo5Fa7vu3-sKX8593PU,6000
CASSIA/agents/reference_agent/reference_agent.py,sha256=ZLEIvMUgoq5q7HR623SEFoMDDOhPdfAsuLc5853Po9k,39726
CASSIA/agents/reference_agent/reference_selector.py,sha256=suzqsdjB51_WTX0p-avO2cY0GVnmye2VVsihz5Gg-lU,12228
CASSIA/agents/reference_agent/section_extractor.py,sha256=yFuy-TH4btAnnKDSAPbUto2f3rAPBXF3bW5uiZzaOao,10587
CASSIA/agents/reference_agent/utils.py,sha256=stbORbiFRCXQElSJGCQ18cdvW4j6P6p61N9_fAd6PfE,5836
CASSIA/agents/subclustering/__init__.py,sha256=uVxhyShdwxHOoX7ykE0Z0rKbWEroekUVqpoAKnTUfN4,652
CASSIA/agents/subclustering/auto_split.py,sha256=JAqjecqxv1v3aBSemP-nVxe9MjJN-KV1wOUIKoMVByI,20270
CASSIA/agents/subclustering/subclustering.py,sha256=tVKVai4H7iV7EfRDdfwQxQSNf5rOPh6cvTdbcJUmUFk,49279
CASSIA/agents/uncertainty/Uncertainty_quantification.py,sha256=NWfYtveuTWEiEV7pYbM0hl6ylUvRCJr5tfzjQ1iHi9E,71957
CASSIA/agents/uncertainty/__init__.py,sha256=LHAXDAyIvXhEqDax-rpVJNfS71sjfcxp_01q08BHPX0,362
CASSIA/cli/AGENT_GUIDE.md,sha256=_qqY-JiW_keIUahUJmJqO0nLiVUNcPyLqrmUWNK41xA,8439
CASSIA/cli/__init__.py,sha256=9ESpveC5eSBcHXr5MZ4uCySqUvorspLZV_nZkECCOEQ,46682
CASSIA/cli/__main__.py,sha256=LODwdIQKfqJeYC4d5GGLVAM1h6mPi1yDx2ITAY38GQE,130
CASSIA/cli/agent_validation.py,sha256=1SM1C04dNH_v-b8UsPU4wcfKmA66ZNMol2vwgsNaJjE,11207
CASSIA/cli/backends.py,sha256=uEqPFB2gwg1UJHDZRX7lFsKoysNlHuV_08c4Kbcx5ZQ,14398
CASSIA/cli/boost.py,sha256=d3pP3WfUHskVavz8R_eUqTtrTYmy8M2qxDOLnwzWGgY,96231
CASSIA/cli/consensus.py,sha256=fEci2Z-uWyBkm0bimZK6XQ9Vu0StaO1_e47-q6fgPM4,21337
CASSIA/cli/examples.py,sha256=c56RSz92-zSN98bR5teM07dzlFO2-eFOeIH9V3ny7sM,15722
CASSIA/cli/judge.py,sha256=vDdsfunqK4xGdUtDN39ZfR8FPGKfEXrD8E7IJM9jOr8,48582
CASSIA/cli/result_schema.py,sha256=lJuR9ichBqgSYFnnySX23F6WFZJHqZJqfE0SIKIlYjw,6549
CASSIA/cli/runner.py,sha256=gtazGdlN-8pgUhgft0ahl6S0UDE6PR0hl4HHHrK532M,32561
CASSIA/cli/subcluster.py,sha256=vugj9WP8o2bXles0lBzzVxlYiobcl0erzx6i_fWHRXM,19597
CASSIA/cli/validate.py,sha256=jpTOQO79Kn9LDfMFPYCV4YMqPncGvgNgLlChjFZtaOA,14444
CASSIA/cli/agent/ARCHITECTURE.md,sha256=MuW8O_JtMCZ_XdsAg11DKhsQa9qvBs2sNXBAt1SPhxU,2021
CASSIA/cli/agent/__init__.py,sha256=eNchqHkWyOcpej-ToTxS-8kcPOOQdYUHIOZv6Fqp2tk,387
CASSIA/cli/agent/automation.py,sha256=724xiLRr1jzUPDmSzEaL0AKjXVusz33XaINeSf1uuLQ,15544
CASSIA/cli/agent/automation_cli.py,sha256=HCodEKOozxYYpqbUg7o-3m4LTPltEBUdyzj5Hvh0wa8,6380
CASSIA/cli/agent/client.py,sha256=KdOQkvfhuE6lQ48INkX8IbGVJR83niPAGtrgNqw-qxo,1828
CASSIA/cli/agent/commands.py,sha256=eNB2pzgrB2ciGQ-_s4T939K1FJhzQc5gngRjOoSiv0Y,36457
CASSIA/cli/agent/daemon.R,sha256=hj0f0y9Fby32tuV1B7A9BgqblaPkcIYwCtaN0xt9RwY,656
CASSIA/cli/agent/direct.py,sha256=2T1-496-1-iyfhzatPjep-UFalfJdOOPSbhlDlyinLQ,14218
CASSIA/cli/agent/experiment.py,sha256=yruQNKkBUU5ItNX9quj03NHBpYviWJpT1r4wNF-CH88,7524
CASSIA/cli/agent/launcher.py,sha256=wWpJZuEoY0VDctX51HucBBs5Q361zS1rCNekwLfg18U,6001
CASSIA/cli/agent/policy.R,sha256=TbZO4nFAaRbjMZGDHSl3AVO3ItF9dM5gGbiauuoELiU,3591
CASSIA/cli/agent/policy.py,sha256=iEzghcTIiAARRAObCboTzGy2AaluCeb7ISx5vc4LdFM,2433
CASSIA/cli/agent/prompting.py,sha256=rihb_oYIZVacf6YWHgQjuL31K4Ux8cIqWY6JoMf8p_o,3733
CASSIA/cli/agent/runtime.R,sha256=0QIycx8mMk8lZO4Dwn20Hic76DNHaZc3s0Om3qgGhUk,49596
CASSIA/cli/agent/state.py,sha256=uOJ8HDj7T_7ei-v2FX6RAqXrS6FqWwb0qv9gTDnnBTo,1516
CASSIA/cli/agent/system_prompt.md,sha256=U4modare_o4bRjX56TrWu-LDozMSMFwSRhkFqObGFEs,11567
CASSIA/cli/agent/transaction_worker.R,sha256=UcouFA5p6JDyCVCNMEBvi4e6XiNB4_AwwDYw-twQnZ8,680
CASSIA/comparison/__init__.py,sha256=1ZFDnU8hGOuoZZIvOu4Sk0pD8AUCrUx2i6ffl5ryVSY,267
CASSIA/comparison/symphony_compare.py,sha256=VA7Sp9cGRpX57QS3mWZBC3lcodC1UdO4Cm34gB5kROQ,24755
CASSIA/config/__init__.py,sha256=9ISC49HsPe8JTQz5YL_qzQU1VGP0VFK7-aNvLxdaUSs,106
CASSIA/core/__init__.py,sha256=hleUd-UuKOsYUW39v19hgRjTgbi6s_hrDpkwrfMjvBU,1955
CASSIA/core/anndata_utils.py,sha256=AESxG177QPXJvE0u6W2noe0XEJY-R2HvewxTnuQVLMU,25651
CASSIA/core/api_validation.py,sha256=a_wJmL885Pjucq1Iz7xCEimUX7RhQH3iA7Fp0crpyfg,13624
CASSIA/core/exceptions.py,sha256=S_DpoDRearQkJ3t1Y4uuPO2iWh6Ldo-oedmbZoHX35k,3010
CASSIA/core/free_api.py,sha256=xkNUlygXxEe9j-f-h7JYh3T-dOLCPNRcTkTCnu5kXC0,13085
CASSIA/core/gene_id_converter.py,sha256=WPKMbB8OaMYNZFVLhJt477aWXKcQ4u8aMqjNaNzsfy0,21827
CASSIA/core/llm_utils.py,sha256=PWRMovt_SU0bHoSIzYehuM20nDMYbkoML79T_c8I7X0,30031
CASSIA/core/logging_config.py,sha256=hKzonpQlGocQJO1pib8r2jzGPOt3vb3RQTUuD3OPUsQ,2736
CASSIA/core/marker_utils.py,sha256=tH1K1WeRI8xJpJs42oR-sZbf34V0VsqpEFJonvGJt6Y,16363
CASSIA/core/model_settings.py,sha256=nzLPxN2FchL9_-VQTuRSaaNyenvsafjrvCHT6yyb0yU,15525
CASSIA/core/progress_tracker.py,sha256=mJJChAMjsOo2uTkm5MsrOv75mlWQ9goRjB6i123COsQ,11714
CASSIA/core/proxy_config.py,sha256=brRh8MBe6wls5oopMN3QhEjv6B4Wwrev7_2iHTurokU,5833
CASSIA/core/subcluster_marker_sets.py,sha256=dMZ9GQ84RFtM4G8atLbUXLnvt0fUF13ndzqKmDymth8,19469
CASSIA/core/utils.py,sha256=h0K1keCKO2CwAtJZJrPrEiploeYhOVN0RLcSNucmrtg,6130
CASSIA/core/validation.py,sha256=IzVpqvUW8glEOvoLWjFGk5SiL-rVAWhLs5LO9fQhZjI,44306
CASSIA/data/CASSIA_Package_Documentation.md,sha256=5_02d8embA4vw7cSJZHntq5hpvDh0MCmmu3kUcpFcGM,17011
CASSIA/data/README_model_settings.md,sha256=av6BagzDIP43clodra5jJmQVH9MzTuykmj-wBBcGi5Y,1362
CASSIA/data/__init__.py,sha256=KEGZU1G_toBBk6_HiKcTe2mqAKXEVEdv5lpMlCAy-Dw,74
CASSIA/data/model_settings.json,sha256=KF14aimlkYkkeR8yxBx7IZQRLsSB0Rqt8fsM2VcOQ0M,8799
CASSIA/data/processed.csv,sha256=X-CicLpys8oqCA5BxGfP0TfdALRkLe30Rk320XwR_HA,2345
CASSIA/data/subcluster_results.csv,sha256=yMthE2_z_vhiJHqXne3N7l7rF5NzzVOfIOI-pV0FlBo,102609
CASSIA/data/unprocessed.csv,sha256=URPL2eduR6P9syen0dNiQCEtxB0XgplZSy2qjib_BsM,3749931
CASSIA/engine/__init__.py,sha256=xslLCFjRM3rS5sTMUXHcb6V5PB86Hk25W-Lmi6p3_wo,997
CASSIA/engine/main_function_code.py,sha256=2xD8YYHpGOq0m30-2EQRpyEgPc7fnOCxcwshTmrY8CM,28384
CASSIA/engine/tools_function.py,sha256=0lCKU3gigXClICMLnju7jEjwquWa4VcSj5erZxmMFs0,56260
CASSIA/evaluation/LLM_evaluation.py,sha256=QUN1d3Aj6OFOaAAW9LGgD_xOTquDCheRH59C9OeIKc4,59922
CASSIA/evaluation/__init__.py,sha256=68n0DxK03gBH5cobKIjZ0r5xOrBXaJAP2CJHwBOqS5s,509
CASSIA/evaluation/cell_type_comparison.py,sha256=U1yoVETXxRjWbQwzVDFxnB8JLaACqcFE5_w2bpCIE7A,43964
CASSIA/evaluation/scoring.py,sha256=JY-rb9de3YxujFIOiIqM2Wuay2RCypCNP1e76XxDGiU,22020
CASSIA/hypothesis/__init__.py,sha256=C8kYZ8A5bSIV4Y7Lgh8qYy9gyLFB09-c5qZ0rBznwfM,594
CASSIA/hypothesis/hypothesis_generation.py,sha256=TJX3dHISftaZpGoIz01UlTXinzzp71E2OUOerhCQdZc,13615
CASSIA/hypothesis/summarize_hypothesis_runs.py,sha256=2gQMlM3I-wdh8ojvO0wwwgsI0aIiInD9oIDrG1YF0nU,7470
CASSIA/imaging/__init__.py,sha256=C-yj_rPBiZJgKrAsJwbRyFbSgvAhnspDBUpPUcrKpvU,279
CASSIA/imaging/llm_image.py,sha256=qcD318OB9Zy3YpLONLpf9C_i2wTxvgnFrjbTRghhjDI,15615
CASSIA/pipeline/__init__.py,sha256=_S5gIDpDUsciaD70e5wJ8iatUeU_vuqJOADeDDOkcNQ,133
CASSIA/pipeline/pipeline.py,sha256=S9qXDuti8yjRjvtZO0hqgDBwbo932OTBfEoZaVNy7-w,24607
CASSIA/reports/__init__.py,sha256=VudDWmZN0gXCW6F3BvZz79D-DEINuPIOw2lZscF1sQ4,776
CASSIA/reports/generate_batch_report.py,sha256=pKyqPHW5BsvGMhbwTgzYQYdU6fvPNUiK3f22KIcwlJY,69175
CASSIA/reports/generate_hypothesis_report.py,sha256=OlgQxgbtP_LFKutmxt-IasKY-C22KhDv7AwE0WKtJo0,5723
CASSIA/reports/generate_report_uncertainty.py,sha256=9teQW5CzJo5-zadky5kihfP3NUiaLIKmsCYTEWkG-XY,39071
CASSIA/reports/generate_reports.py,sha256=tBUOkEq9GmVnyHf-uqLkqrIvzo630kGzhIy_JCVTyk4,48844
cassia-1.4.0.dist-info/METADATA,sha256=IkQX9BJ6mFD0qnRKk5vS3BenIFH6AOvq_2vXstYXO0M,10012
cassia-1.4.0.dist-info/WHEEL,sha256=YVMoNqKzERt-wjUZwJ33xBGAwnFl-4cqbYkTtWa4itE,91
cassia-1.4.0.dist-info/entry_points.txt,sha256=t8hk-oXjgxUc3av1egloH2hdY-hO_dbSTgBUmW2ade0,43
cassia-1.4.0.dist-info/top_level.txt,sha256=nxc6HHjkgncCyWdOEzRHJOEPfWvbJYUgSXSWBgihyjU,7
cassia-1.4.0.dist-info/RECORD,,
